PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g887280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 299aa    MW: 33510.9 Da    PI: 4.9809
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g887280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.38.5e-134489145
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer 45
                      rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++ 
  Pd.00g887280.m01 44 RWPRQETLTLLEIRSRLDFKFKEANQKGPLWDEVSRIMcEEHGLSL 89
                      8***********************************9988898875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MHIFGFKCAG GGAAANSATV TASLSGGGGL MEAEAGGDIG GSGRWPRQET LTLLEIRSRL  60
DFKFKEANQK GPLWDEVSRI MCEEHGLSLS NSSEFDTSSS EDQDNNDVSA AAMDDDSPDI  120
KTMRKRRGGR GWKVKIKEFI DAQMRKLMEK QEEWLERLMR TLEQKERERM VREEEWRKQE  180
VERVEKEHNS DHDQIVHNTS SARELLNKKR KENVNSKSSA CYFQNNESCS SLYSSQGGYC  240
AEMNDHEQGG NNDGSNNSPC GNANVGNAVQ DNCFPFLMSE GENLWENYGL KLSKGSQNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10000.11e-23Trihelix family protein