PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g888590.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 260aa    MW: 29483.8 Da    PI: 6.9942
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g888590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.2e-171058148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl
  Pd.00g888590.m01 10 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 58
                      79*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MTLSKANVKK GPWSPEEDAK LKEYIEKYGT GGNWIALPQK AGLRRCGKSC RLRWLNYLRP  60
NIKHGEFSEE EDRIICNLFT NIGSRWSIIA AQGSNNSTAY YAQTRSFSSA LEPISFSPSL  120
LSRSSTNAAS VLHQVHQERF VGRAMQHNYQ VKDNILMFGG EASCSSSDGS CSNQISQCRD  180
REYEYNYNFF NGGEGHQKIM LPDGLNGWRS EKQNGNGIWE DQAPLDYGLE EIKQLISSTS  240
SCNNFLFDEN KTEEKAMMYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.11e-53MYB family protein