PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g888830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 222aa    MW: 23798.5 Da    PI: 5.9443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g888830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.39.8e-17160206455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g888830.m01 160 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 206
                       6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGDTYDHYYK NATCSSSPSA SVSPAAAPAQ PPSTSDEISL FLQQILLRSS SSLASVVAHT  60
GKAPQFLFSS SPSVAAVPDH LSRPCHSMFL GDGITAVDSS AALLPAGNPN VSSSSFGASE  120
NETDEYDCES EEGLEALVEE AAGKPGCGRS SSKRSRAAEV HNMSEKRRRS RINEKMKALQ  180
NLIPNSNKTD KASMLDEAIE YLKQLQLQGP ENMKAYHQIF KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-29bHLH family protein