PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g889190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 618aa    MW: 68607.6 Da    PI: 5.9472
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g889190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4401.7e-1342536171374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g889190.m01 253 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 345
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g889190.m01 346 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 433
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g889190.m01 434 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 520
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+ +e+ GFk+v+ls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+++++
  Pd.00g889190.m01 521 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRKVMESKGFKSVALSANAVTQSKILLGLYSCDGYRMTEDKGCLLLGWQDRSIMAA 613
                       ********************************************************************************************* PP

              GRAS 371 SaWr 374
                       SaWr
  Pd.00g889190.m01 614 SAWR 617
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MSISMSESKK TTTPPSSEME QSSLTPPSLN FPTLKFELDG DVEVQSPDHS IWESLLFSEQ  60
FDTDFMVLSP VPNNMPDSPQ PGASLSAAHN NYNYYNYAQS MQGQSLSGCS PPRFSPHLGA  120
FSSTHNPKGK GLSPLRRVFN SPVNQYMQPA DQNMQSIPPA SIEDFLDDYQ RDSFIAAYQN  180
PTTTTTTSSS KMSGTSSQSY NPHDMPTSST VPAAPLDCLP MQNSSRFSRS NLNYMAPNLP  240
MAPEQEQDSG LQLVHLLLAC AEAVAKEDFM LARRYLHHLN RVVTPLGDSM QRVASCFTEA  300
LSARLTATLT TNPAASAPKP FSPFPPNSLE ILKIYQIVYQ ACPYIKFAHF TANQAIFEAF  360
ESEERVHVID LDILQGYQWP AFMQALAARP GGAPFLRITG VGPCIEAVKE TGRCLTELAL  420
SLHVPFEFHA VGEQLEDLKP HMFNRRIGEA LAVNTVNRLH RVPGNYLGNV LAMIRDQAPN  480
IVTLVEQEAS HNGPYFLGRF LEALHYYSAI FDSLDATFPP DSAQRAKVEQ YIFAPEIRNI  540
VACEGAERTE RHERLEKWRK VMESKGFKSV ALSANAVTQS KILLGLYSCD GYRMTEDKGC  600
LLLGWQDRSI MAASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-97GRAS family protein