PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g892480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 363aa MW: 41299.7 Da PI: 4.4334

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g892480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.1	2.5e-21	8	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+Gf FhP+d++l+ +yL++kv gk+++ ++++++y + ePw++ k + + +++yfF++ ++k g+r r++ +g W+ + Pd.00g892480.m01 8 LPVGFYFHPKDSDLLGYYLHNKVFGKPMKY--EVPKINLYGTsEPWKIWKDFGGdgleIGEDLYFFTTLKTK---GTRVFRKAGNGCWHGENS 95 79***********************999..599998769*864444212124577998765...89*********9877 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 k vl+ ++++ g + + + + ++ ++ W+mhey+l Pd.00g892480.m01 96 AK-VLDPnnEQKVLGFSRRFHYK--NPKSDQNGCWIMHEYSL 134 55.55552344556777766665..66666799*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGPCAVDLPV GFYFHPKDSD LLGYYLHNKV FGKPMKYEVP KINLYGTSEP WKIWKDFGGD 60 GLEIGEDLYF FTTLKTKGTR VFRKAGNGCW HGENSAKVLD PNNEQKVLGF SRRFHYKNPK 120 SDQNGCWIMH EYSLKDYPSM PKSKSSSVSD DDGDQLVLCR IRKNDQKLHK NERKRKFKSA 180 AEDLGIDDAP VQSKSKIQKI NIDDHDPIGL TSHEPEFVTN PIGLTQSNHQ PEMIDDNQLL 240 GDDFDEALNI AFSYLDGPTI IDNNTTPQMQ SYSSMLLCAE REEMGNTPYT DHETECHTSQ 300 SFATGSEFIE VTDDIGFGTS EETSHEYLDI DDQIALINMS EPDYLQLDDH VFEMSLFDDD 360 DPQ

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGPCAVDLPV GFYFHPKDSD LLGYYLHNKV FGKPMKYEVP KINLYGTSEP WKIWKDFGGD  60
GLEIGEDLYF FTTLKTKGTR VFRKAGNGCW HGENSAKVLD PNNEQKVLGF SRRFHYKNPK  120
SDQNGCWIMH EYSLKDYPSM PKSKSSSVSD DDGDQLVLCR IRKNDQKLHK NERKRKFKSA  180
AEDLGIDDAP VQSKSKIQKI NIDDHDPIGL TSHEPEFVTN PIGLTQSNHQ PEMIDDNQLL  240
GDDFDEALNI AFSYLDGPTI IDNNTTPQMQ SYSSMLLCAE REEMGNTPYT DHETECHTSQ  300
SFATGSEFIE VTDDIGFGTS EETSHEYLDI DDQIALINMS EPDYLQLDDH VFEMSLFDDD  360
DPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62380.1	1e-14	NAC family protein