PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g894090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 171aa MW: 19030.4 Da PI: 9.96

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g894090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.2e-18	43	90	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l ++v+++G g+W+++ r g++R++k+c++rw ++l Pd.00g894090.m01 43 KGPWTAVEDQILMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 90 79******************************************9996 PP
2	Myb_DNA-binding	22.6	2.4e-07	96	123	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+++++E+ l++++++++G++ W++ a+ Pd.00g894090.m01 96 KGAFSPDEERLILELHAKYGNK-WARMAS 123 799*****************.9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MTPSSSNNNS GLLQQSEGRS PQELNGGGVG GGDVVEGSRG LKKGPWTAVE DQILMEYVRK 60 HGEGNWNAVQ RNSGLNRCGK SCRLRWANHL RPNLKKGAFS PDEERLILEL HAKYGNKWAR 120 MASQKLLQRA SNLIVSVLFC IVTWANRQRN KELLEHEGEE EATPRPTAIS Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	2e-49	MYB family protein