PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g897620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family DBB
Protein Properties Length: 206aa    MW: 22596.7 Da    PI: 6.631
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g897620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.35.6e-07433534
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                       C+ +e   ++ fC  ++  lC++C ++ H
  Pd.00g897620.m01  4 LCDVCEGAAAIVFCSADEAALCRSCDEKVH 33
                      7******99******************998 PP
2zf-B_box27.56.5e-095292238
          zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                      + ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  Pd.00g897620.m01 52 DVPCCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHR 92
                      5789**************************99966666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MRTLCDVCEG AAAIVFCSAD EAALCRSCDE KVHMCNKLAS RHVRVGLASP SDVPCCDICE  60
NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HRRYLLFRQR VEFPGDKPGR SEELGLQPLD  120
QKEVRKDHIQ PPSLSIRGNQ QNCSASPVAV LDNNIVGDYK MDNRLIDLNT RPQRMNGQAS  180
TSPGLDVQNG VNDESASVVP VGSFKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.15e-85DBB family protein