PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g898520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 136aa    MW: 15717.1 Da    PI: 4.0693
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g898520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.2e-08750246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                       rW++++ el++ a++q G++ ++ I +    gRt+ q+k+++ k
  Pd.00g898520.m01  7 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 50
                      69*******************.*****98766**********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MDKTPTVRWS KQDTELFYGA IQQCGSDFTM IQELYFPGRT RHQIKLKFKK EERQNPLRIN  60
EAVLSRSTCS TVAQANKEEE AEPTRDTDEG VKKTELEEPE DQEADVAEVQ EEAVDAEVDN  120
PLKSDEIDDE EFTWSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-23MYB_related family protein