PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g901000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 224aa    MW: 24992.2 Da    PI: 9.5288
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g901000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.9e-33145203159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK vk++ +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg+Hnh+
  Pd.00g901000.m01 145 LDDGYRWRKYGQKAVKNNLYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGTHNHP 203
                       59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEGHQEPTYP PPLTPLTPSS LISLPFLLPP QNPLFTPSSA STAPSSSSQL ISPALLEPQQ  60
HQVLPDIDWV SLLSGSPAAG FDGQEINNYK PLVENNNVGA SAENINEADR EGKGANSKRK  120
GGGRMRKPAS RPRFAFQTRS ADDILDDGYR WRKYGQKAVK NNLYPRSYYR CTHHTCNVKK  180
QVQRLSKDTS IVVTTYEGTH NHPCEKLMET LTPLLKQMQF LSRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.11e-56WRKY family protein