PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g902430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 248aa    MW: 27387.8 Da    PI: 9.6657
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g902430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.57.8e-37101012102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+kell
  Pd.00g902430.m01  10 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDNFRRGQKELL 93 
                       9***************************************************************9998.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i+r+ks
  Pd.00g902430.m01  94 SEIRRRKS 101
                       ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAQRSVPAPF LTKTYQLVDD PSWDDVISWN ESGTTFVVWK TVDFARDMLP KYFKHNNFSS  60
FVRQLNTYGF RKTVPDQWEF ANDNFRRGQK ELLSEIRRRK SVTAGAGKAT ASEKSGGPST  120
PSNSGEEMAS TSTSSPDSKN PGSVETAAMG QASDLSGENE KLKKENENLS SELAQTKKQC  180
DELVGFLMDY LKLFGVWVKG DEKKKSKRTE RDEKFGVGVG VGVGGTYAKK MKSAEFGAPM  240
VKSGKVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-74HSF family protein