PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g903360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 1062aa MW: 118246 Da PI: 8.5088

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g903360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	20	41	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + LkrH+++H Pd.00g903360.m01 20 TCQECGATFKKPACLKRHMQSH 41 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence
MEMTKEADGN GGGEREKSNT CQECGATFKK PACLKRHMQS HFLEVLFAIV PLRIDILKKY 60 MLDNVERYIP HKELQNARGF DLNGPVLGGR PPGKLHQAGL NHANAKEGDK VANQLQSTGI 120 SSGGDGAASS LAPKQEEVKR LQGGKIKKKG YFAEADEKFR SRPKGGPPET KEMPTYNIRG 180 IDVDFPFEAY DCQLVYMEKV IQSLQERSNA LLESPTGTGK TLCLLCATLA WRKSLGVFST 240 GPNVKMSLIT GEKSGVPLSQ SATKDLPTII YASRTHSQIR QVIKELKRSS YRCPYYLSRE 300 LHKVVDILFA PYNYLIDHGY RKSLQIDWKN SILIFDEAHN LESICADAAS FDLPSWLLTA 360 CISEAKNCID LSIKRREEST DKSQNPDDFA ILRALLLKLE KRISEVPIES KELGYTKPGP 420 YIYELLAELN ITQDTVPKLI KILEDATVLI EEENQNKANR SVCRLESISD MFNLIFRDTD 480 NNHAKSYRVH VQEVEAAAID GLKGKASRTL SWWCFHPGIA MEEFAKMNVG SIILTSGTLS 540 PLDSFAQELK LEFPVRLENP HVITPNQIWA GVVPAGPSGF SFNSSYRNRD SLEYKRDLGN 600 AIVNFARIVP DGLLVFFPSY YILDQCIACW KNTSHANSTT IWERISKHKK PVVEPRQSLL 660 FLLSIEDYMA KLKDTSASGA VFFAVCRGKV SEGLDFADRA GRAVVITGLP FATRNDPKVC 720 TTKSSISNIA LDTTSCQGTS GKIYELKTEQ PPEKLYLDKF LPLTTAVSQD CPVKSSSSLL 780 KAGRDKLSSL LGEVLPANRS SLTSCKDQSV SLKCSNNLLR NEKKLLICER ETLQCQDSKV 840 FGFPGKNEKR GEELITPCSA KRCKLSTEHD SVHLIDNSNK HSSLAKDSDS YGGFPNINLR 900 SESSHTSDSS SSQNAQVGSA LLHKDKRIIQ QGDAEFLSNK NNSAISIPVL SGDKETRGSE 960 FLVQVEEKLS TLEYREFVNL MKALKSKAMK MNEVLQSIAS LFSGRERLPL LKRRLRKDAL 1020 DHEATVCFVV EYKATALIVH GELVAKAAFT IAYWHPQPFM MK

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence

MEMTKEADGN GGGEREKSNT CQECGATFKK PACLKRHMQS HFLEVLFAIV PLRIDILKKY  60
MLDNVERYIP HKELQNARGF DLNGPVLGGR PPGKLHQAGL NHANAKEGDK VANQLQSTGI  120
SSGGDGAASS LAPKQEEVKR LQGGKIKKKG YFAEADEKFR SRPKGGPPET KEMPTYNIRG  180
IDVDFPFEAY DCQLVYMEKV IQSLQERSNA LLESPTGTGK TLCLLCATLA WRKSLGVFST  240
GPNVKMSLIT GEKSGVPLSQ SATKDLPTII YASRTHSQIR QVIKELKRSS YRCPYYLSRE  300
LHKVVDILFA PYNYLIDHGY RKSLQIDWKN SILIFDEAHN LESICADAAS FDLPSWLLTA  360
CISEAKNCID LSIKRREEST DKSQNPDDFA ILRALLLKLE KRISEVPIES KELGYTKPGP  420
YIYELLAELN ITQDTVPKLI KILEDATVLI EEENQNKANR SVCRLESISD MFNLIFRDTD  480
NNHAKSYRVH VQEVEAAAID GLKGKASRTL SWWCFHPGIA MEEFAKMNVG SIILTSGTLS  540
PLDSFAQELK LEFPVRLENP HVITPNQIWA GVVPAGPSGF SFNSSYRNRD SLEYKRDLGN  600
AIVNFARIVP DGLLVFFPSY YILDQCIACW KNTSHANSTT IWERISKHKK PVVEPRQSLL  660
FLLSIEDYMA KLKDTSASGA VFFAVCRGKV SEGLDFADRA GRAVVITGLP FATRNDPKVC  720
TTKSSISNIA LDTTSCQGTS GKIYELKTEQ PPEKLYLDKF LPLTTAVSQD CPVKSSSSLL  780
KAGRDKLSSL LGEVLPANRS SLTSCKDQSV SLKCSNNLLR NEKKLLICER ETLQCQDSKV  840
FGFPGKNEKR GEELITPCSA KRCKLSTEHD SVHLIDNSNK HSSLAKDSDS YGGFPNINLR  900
SESSHTSDSS SSQNAQVGSA LLHKDKRIIQ QGDAEFLSNK NNSAISIPVL SGDKETRGSE  960
FLVQVEEKLS TLEYREFVNL MKALKSKAMK MNEVLQSIAS LFSGRERLPL LKRRLRKDAL  1020
DHEATVCFVV EYKATALIVH GELVAKAAFT IAYWHPQPFM MK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-07	C2H2 family protein