PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g905770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 686aa MW: 77820.9 Da PI: 5.5511

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g905770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.5	6.9e-06	425	482	6	51
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51 ft++++ e+e+l + ++ +s+e ++LA++ ++t +qV+ WFqN+ Pd.00g905770.m01 425 VFTHSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 482 69*********99555*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MAASPQPVSE NPIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ 60 NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ 120 VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE 180 KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDTVQGKE LGTVCCLYKH SQNVLEDEWD 240 SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA 300 WSGGQYKHVI GRPIFKGEED RISMAFLYSP PTFISNSQSN KEKTISLGEQ AIMAIFLTLV 360 YQFLVFQLAT GSKSRRHRSS SEPRLLSKPP LGVELRLKTQ KPREKEMDME LFRTRKREPM 420 NSLSVFTHSE IMEMENLIKH PRQQSLSQEF FQDLATSFSC TPIRAGKPDI TWEQVQSWFQ 480 NKQKELQANS NSSPTALELF VDLSDSNVSS NATENSQKPK GKWSTELHEL AFEARSARDD 540 AWYDVASFLS YRVVNSGELE VRVRYSGFGR EDDEWVNVTR AVRERSIPLE ASECHKVKVG 600 DLVLSFQERE HQAVYCDAHV VDIQRGLHDV TGCKCIFVVR FDHDNTEEEI QLGRLCIRPA 660 QNTSAVTNTQ QHDLFRNKDM KFSFLY

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MAASPQPVSE NPIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ  60
NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ  120
VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE  180
KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDTVQGKE LGTVCCLYKH SQNVLEDEWD  240
SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA  300
WSGGQYKHVI GRPIFKGEED RISMAFLYSP PTFISNSQSN KEKTISLGEQ AIMAIFLTLV  360
YQFLVFQLAT GSKSRRHRSS SEPRLLSKPP LGVELRLKTQ KPREKEMDME LFRTRKREPM  420
NSLSVFTHSE IMEMENLIKH PRQQSLSQEF FQDLATSFSC TPIRAGKPDI TWEQVQSWFQ  480
NKQKELQANS NSSPTALELF VDLSDSNVSS NATENSQKPK GKWSTELHEL AFEARSARDD  540
AWYDVASFLS YRVVNSGELE VRVRYSGFGR EDDEWVNVTR AVRERSIPLE ASECHKVKVG  600
DLVLSFQERE HQAVYCDAHV VDIQRGLHDV TGCKCIFVVR FDHDNTEEEI QLGRLCIRPA  660
QNTSAVTNTQ QHDLFRNKDM KFSFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	7e-56	HB-other family protein