PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g911090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 196aa    MW: 21503.3 Da    PI: 9.9842
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g911090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00174769123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C++ F++   L  H  +H
  Pd.00g911090.m01 47 FECKTCNRQFPSFQALGGHRASH 69
                      89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MTMKRSIAEM RELDRSLTMA NCLMLLSRGS HDHNHYDTFS ASPTRVFECK TCNRQFPSFQ  60
ALGGHRASHK KPRLMGSGDG NSSNGSDQSQ SQGSPPKPKT HECNICGLEF AIGQALGGHM  120
RRHRSALSNN NNNISQYSDS NSNSLSLSPQ PAPMFQVLKK TNSGRRVMCL DLNLTPLEND  180
LKILQIGKAA PLVGFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-37C2H2 family protein