PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g912090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 585aa MW: 65848.1 Da PI: 8.9679

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g912090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.3	9.3e-22	67	152	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+++GFs+r+s+ +k ++g+ +r fvC egkre +k+ ++ + +raetr+gC a++k++ ++k++v+++++eHnH Pd.00g912090.m01 67 KFYNAYAYNIGFSIRRSSFHKF-KSGQLRDRLFVCFAEGKREIDKRV-SNVKYHRAETRCGCLARMKISCYLNEKYRVIEFVSEHNHV 152 6***************9999.6777************9988.89999********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MNMENNCMED GEGETSTGLN ISEGESNEKS SQAMKGNEKI DLVHSSIRKQ LIPVIGMEFE 60 TEDLAFKFYN AYAYNIGFSI RRSSFHKFKS GQLRDRLFVC FAEGKREIDK RVSNVKYHRA 120 ETRCGCLARM KISCYLNEKY RVIEFVSEHN HVTTSPSKTH LFRSHRKITL AQIAEVDMAD 180 SSGIAPKAAL EFLSRQAGGR ESLGFIPDDY KNYLHSKRTR EMKSGDTGGV LELVEDRRYE 240 ELKAEFKASQ SSPTLSFPVE ILKHAANVYT PKVFKVFQDE LCKAYDCSLH FIDEMGTISK 300 YVVIPYGKNW QHIVTFDSTN NVTICSCKKF EFAGILCAHA LKVLSTRNVK SIPAQYILKR 360 RTKNVKAMSA KINSSSSTND PKVEIVRRYR ELCRLHTQLA TRAVGCGKAY EIVIQRLNQT 420 FDEVDACLKE KSSQEMSEVI SPVINSRSEL NEYINVDDDI IKARGIKIKE RVVGSSKRPK 480 NALEKLAKKR RTRKIELPNS SSVDSICVPT TKAAPAPLSE FSQELVAVNN LNMEFPVSMV 540 NLLQAQSPLE GEFGLFSSQF TSTGAKSSSV EVDPPFSIDK SHQAS

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MNMENNCMED GEGETSTGLN ISEGESNEKS SQAMKGNEKI DLVHSSIRKQ LIPVIGMEFE  60
TEDLAFKFYN AYAYNIGFSI RRSSFHKFKS GQLRDRLFVC FAEGKREIDK RVSNVKYHRA  120
ETRCGCLARM KISCYLNEKY RVIEFVSEHN HVTTSPSKTH LFRSHRKITL AQIAEVDMAD  180
SSGIAPKAAL EFLSRQAGGR ESLGFIPDDY KNYLHSKRTR EMKSGDTGGV LELVEDRRYE  240
ELKAEFKASQ SSPTLSFPVE ILKHAANVYT PKVFKVFQDE LCKAYDCSLH FIDEMGTISK  300
YVVIPYGKNW QHIVTFDSTN NVTICSCKKF EFAGILCAHA LKVLSTRNVK SIPAQYILKR  360
RTKNVKAMSA KINSSSSTND PKVEIVRRYR ELCRLHTQLA TRAVGCGKAY EIVIQRLNQT  420
FDEVDACLKE KSSQEMSEVI SPVINSRSEL NEYINVDDDI IKARGIKIKE RVVGSSKRPK  480
NALEKLAKKR RTRKIELPNS SSVDSICVPT TKAAPAPLSE FSQELVAVNN LNMEFPVSMV  540
NLLQAQSPLE GEFGLFSSQF TSTGAKSSSV EVDPPFSIDK SHQAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	3e-24	FAR1 family protein