PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g917560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 352aa    MW: 40012.8 Da    PI: 9.742
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g917560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.51.9e-16108192899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        d ++++ l++p  f+++++g      + t++ ++g+ W v+l  ++++++ ++ kGW +Fvk++ +++ Df++F +dg sef   v++++k
  Pd.00g917560.m01 108 DDDFSKH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCWAVEL--EQRRDGLFFYKGWPGFVKDHFIESDDFLIFDYDGGSEF--DVTIYDK 192
                       4666666.********8887774..348***************..*********************************98998..8888876 PP
2B3331.1e-10231324398
                       EE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       k+++p d  +   l +pk+ a +      +g+   + t++l+d++grsW v+l +  ++gr  +++ W+   + n++  gD+++F++++  ++
  Pd.00g917560.m01 231 KIFKPRDLYS---LLIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIIFEFVK--QG 316
                       5555555444...6899999988877665333.35679***************.678888899***********************765..67 PP

                       ..EEEEE- CS
                B3  91 elvvkvfr 98 
                         ++++fr
  Pd.00g917560.m01 317 VILIHIFR 324
                       77999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MSRLQTRWSR GYGFFKFQKA KAEGEETSAS QPQRTSRRST PSEVVSHLKG NLGPSTSSPG  60
AEQSLVELGR VWWAPISERF LIIHFRFQMD KKLKCPLERP SFRVFLVDDD FSKHLRIPPA  120
FIKNFNGRRL GKCTMRGPTG KCWAVELEQR RDGLFFYKGW PGFVKDHFIE SDDFLIFDYD  180
GGSEFDVTIY DKTCCEKDVK AAAKRHASDH LAETSTGGPI SFRSENACFT KIFKPRDLYS  240
LLIPKSIAVT EGLMSSEGVL IKETIMLQDQ TGRSWLVQLH VTCDGRLEMK REWRTCRDTN  300
QISHGDTIIF EFVKQGVILI HIFRGRGEGN SSSVVVLSGV LPRKSSQRPI AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.17e-16B3 family protein