PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g919940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 118aa    MW: 13440.2 Da    PI: 10.5282
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g919940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY134.61.2e-411681105170
             YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                         +e+pr+p + rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  Pd.00g919940.m01  16 GADELPRPPAITRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 81 
                       56799***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MNQTSVNDFA VRPRGGADEL PRPPAITRPP EKRQRVPSAY NRFIKDEIQR IKSVNPDISH  60
REAFSAAAKN WAHFPHIHFG LMPDQTVKKT NVRQQEGEDV LMKDGFFASA NNVRVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-51YABBY family protein