PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g922700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 176aa    MW: 20298.2 Da    PI: 10.146
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g922700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.91.2e-2611100190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       k+Y +YA++vGF vr+ + ++s  +g++  r++ C+k+g++ ++k k   e+++r++ r gC+a++ vk+ek+gkw+vt+++++HnH+l+
  Pd.00g922700.m01  11 KYYTDYARQVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGKFGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVKDHNHPLV 100
                       69*********************************************9****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEFDSEDAAR KYYTDYARQV GFVVRVMQRR RSGIDGRTLA RRLGCNKQGF SPNQKGKFGP  60
EKKPRPSARE GCNATILVKM EKSGKWVVTR FVKDHNHPLV VTASGFSTAG DKDRKIEELM  120
MELERQDQLC AGYREKLLSF MNNVEAETEE LSEKIQVIVD NVRKVESEVQ KHSRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.19e-70FAR1 family protein