PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g926780.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 93aa    MW: 10392.8 Da    PI: 10.4087
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g926780.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.7e-05325123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C+k+Fs+   L  H+r H
  Pd.00g926780.m02  3 HRCKLCNKTFSSGKVLGGHMRGH 25
                      79*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MEHRCKLCNK TFSSGKVLGG HMRGHGTKNS AKAEKKLKVS NVDFEGDDDE HAGYGLRVNP  60
KKSWKFSGSK VQASEKESLC KRKEGDSVLQ RLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16610.11e-14C2H2 family protein