PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g929680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 117aa    MW: 13635 Da    PI: 9.2542
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g929680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS129.83e-401116258374
              GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgy 349
                       +eal+yysa+fdsl+a lp+ +  r+k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF+++p++  +  +ak  l k+k  +gy
  Pd.00g929680.m01   1 MEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MLVNAKQWLGKIKvCEGY 91 
                       69*********************************************************************97..5678999******99*** PP

              GRAS 350 rveeesgslvlgWkdrpLvsvSaWr 374
                       ++ ee+g+lvlgWk++p+v++S+W+
  Pd.00g929680.m01  92 TILEEKGCLVLGWKSKPIVAASCWK 116
                       ************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MEALHYYSAI FDSLDAMLPK YDTRRAKMEQ FYFAEEIKNI ISCEGPARVE RHERVDQWRR  60
RMSRAGFQAA PIKMLVNAKQ WLGKIKVCEG YTILEEKGCL VLGWKSKPIV AASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.12e-30GRAS family protein