PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g932600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 98aa    MW: 10924.2 Da    PI: 4.5618
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g932600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26058.61.8e-1868027101
            DUF260  27 pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                         +f  +h +FGa++++++l++lp +er  a  ++++eA+ ra dP yG+v+ il+lq+q+ + +a+l++++e+l
  Pd.00g932600.m01   6 ITDFSSIHNVFGANKMSRILSKLPMSERAVASWTMTFEAHPRAVDPTYGCVSYILDLQEQVLNIQAQLDEAHEQL 80 
                       5789******************************************************************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MHEEAITDFS SIHNVFGANK MSRILSKLPM SERAVASWTM TFEAHPRAVD PTYGCVSYIL  60
DLQEQVLNIQ AQLDEAHEQL ARAVAPVANP NQDLENSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.14e-25LBD family protein