PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g937420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 209aa    MW: 23987.8 Da    PI: 4.8867
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g937420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.33.3e-35221132102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++         weF +++F+kg+k++l
  Pd.00g937420.m01  22 FLLKTYMLVEDPATDDVISWNDDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVSTSR---------WEFCNDKFRKGEKDQL 105
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i+r+k 
  Pd.00g937420.m01 106 CDIRRRKA 113
                       *****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MEGVCDQKGL LEYVRKSSPP PFLLKTYMLV EDPATDDVIS WNDDGSAFVV WQPAEFARDL  60
LPTLFKHSNF SSFVRQLNTY GFRKVSTSRW EFCNDKFRKG EKDQLCDIRR RKAWASKQQP  120
INNIALNQAA QAMPNQDEFD EDQRSNSSTS SSSDYSSLVD ENKRLKQENG VLSSELTSMK  180
RKCKELLDLV VKYGDSAEKE EENSILEAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.16e-64HSF family protein