PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g937950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 332aa MW: 36580.6 Da PI: 8.941

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g937950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	266	288	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H + H Pd.00g937950.m01 266 ECPQCGAKFSSVTTLVDHVEKvH 288 5*****************99888 PP
2	zf-C2H2	15.6	4.6e-05	305	326	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C+k F+++ L+ H + H Pd.00g937950.m01 305 CPKCSKGFRDPVALVEHVERdH 326 *****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEARSSYTET AAPANSRNQI QKEDEGRRKK FRRHLFVPTE ISAAPSATLH QVLCVVLPWK 60 QFLTEEPAIP LLIVFCLEHQ SYIKHNCPKA DKQNVTVVIC PLCAKGVHLI PDEDANITWE 120 RHVNTECDPS NYEKATKKKK CHVPGCKELL TFSNTIKCRD CMVDHCLKHR FGPDHKCPGP 180 KKPTTGFPFS GLLSRSRKEV LKPNHAPAAS SSNWSNSFLT AASSFRASAE ASVAKLSSEL 240 SQKWQIAKDG AGQSSNSGSR NGQLEECPQC GAKFSSVTTL VDHVEKVHER GGNKVGVKKA 300 TIDACPKCSK GFRDPVALVE HVERDHGGTS RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	4e-96	C2H2 family protein