PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g938410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 251aa MW: 26223 Da PI: 7.2505

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g938410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00054	111	133	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Pd.00g938410.m01 111 YECKTCNRTFPSFQALGGHRASH 133 99**********99999998887 PP
2	zf-C2H2	13.6	0.00019	201	223	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Pd.00g938410.m01 201 HECSICGAEFTSGQALGGHMRRH 223 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGCKEQQHNN IIIKGKRTKR LRPQSPIPFA IPTSSSSPED GGGGDGGGEN DYINSATNLS 60 PTTSAEFQDS TSEEEEDMAN CLILFLEATT AVGPTGAKAG AVAAGGGYYA YECKTCNRTF 120 PSFQALGGHR ASHKKPKANT GDDQKNKHFA IGLLPSGEED TQLSKNSILH NNNNTSSSPL 180 SLHLSNRGLV LSSNKSSSKV HECSICGAEF TSGQALGGHM RRHRAPAAAN TTLALTAPSG 240 LVGIGLEDVP N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-33	C2H2 family protein