PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g942490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 595aa MW: 66268.6 Da PI: 9.3758

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g942490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.8e-19	51	97	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l++av+++ g++Wk+Ia++++ Rt+ qc +rwqk+l Pd.00g942490.m01 51 KGGWTEEEDKILAHAVQKFNGRNWKKIAECVP-DRTDVQCLHRWQKVL 97 688***************************.**********986 PP
2	Myb_DNA-binding	56.6	5.8e-18	103	149	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+l++++v++ G++ W+ Ia+ ++ gR +kqc++rw+++l Pd.00g942490.m01 103 KGFWSKEEDDLIIELVAKQGNKKWSEIAKSLP-GRIGKQCRERWHNHL 149 688***************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	155	197	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ E++ l++a+k +G++ W+ Ia+ + gR+++++k++w+ Pd.00g942490.m01 155 RTAWTKAEELTLIEAHKIYGNK-WAEIAKFLH-GRSENSIKNHWN 197 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG RMAGPIRRST KGGWTEEEDK 60 ILAHAVQKFN GRNWKKIAEC VPDRTDVQCL HRWQKVLNPD LVKGFWSKEE DDLIIELVAK 120 QGNKKWSEIA KSLPGRIGKQ CRERWHNHLN PDIKRTAWTK AEELTLIEAH KIYGNKWAEI 180 AKFLHGRSEN SIKNHWNSSV KKKLELRSSH ASDMGTQNIK SESRKREVVK QGLDQKANME 240 RNVETCSLDL NLVLGTANRR ESQMQSSDKG NCGWLTKGAA ANKMMKTPPR TVFYDRAAAA 300 CGLNIEQCQE TSSNCGRLRD SHNVNANNHY NNICNAAPDY LGFPFSHTRN HKPSDPIHLL 360 PSRPLPRPPQ ASLNAGLGVH GCKRTAGYFI NKPVLPVTAQ GLYESSSGPQ AYEKKKDGGA 420 PVNSKNSSHG RLCYRPFQLE DVEFYLENGE FPSTDSYIQT ECSSVSFCTP TSHDTRIFVD 480 CNSPDSTLRS AARTFEKSPS IIRKRRHSVS RKSVNAANHG DSVCSKEISN NFRNSPHLLG 540 LSPCGRTNSS SMVHSPPRSQ KFGDSAVMKS VEKCLEHAFD VEWDSASAVS RTLSP

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG RMAGPIRRST KGGWTEEEDK  60
ILAHAVQKFN GRNWKKIAEC VPDRTDVQCL HRWQKVLNPD LVKGFWSKEE DDLIIELVAK  120
QGNKKWSEIA KSLPGRIGKQ CRERWHNHLN PDIKRTAWTK AEELTLIEAH KIYGNKWAEI  180
AKFLHGRSEN SIKNHWNSSV KKKLELRSSH ASDMGTQNIK SESRKREVVK QGLDQKANME  240
RNVETCSLDL NLVLGTANRR ESQMQSSDKG NCGWLTKGAA ANKMMKTPPR TVFYDRAAAA  300
CGLNIEQCQE TSSNCGRLRD SHNVNANNHY NNICNAAPDY LGFPFSHTRN HKPSDPIHLL  360
PSRPLPRPPQ ASLNAGLGVH GCKRTAGYFI NKPVLPVTAQ GLYESSSGPQ AYEKKKDGGA  420
PVNSKNSSHG RLCYRPFQLE DVEFYLENGE FPSTDSYIQT ECSSVSFCTP TSHDTRIFVD  480
CNSPDSTLRS AARTFEKSPS IIRKRRHSVS RKSVNAANHG DSVCSKEISN NFRNSPHLLG  540
LSPCGRTNSS SMVHSPPRSQ KFGDSAVMKS VEKCLEHAFD VEWDSASAVS RTLSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-86	MYB family protein