PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g942630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 132aa    MW: 14425.1 Da    PI: 5.9182
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g942630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB144.72.1e-451781794
             NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94
                      mkk+lP+n+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy+epl++yl++yre +
  Pd.00g942630.m01  1 MKKALPQNGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYREGD 78
                      9**************************************************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MKKALPQNGK IAKDAKDTVQ ECVSEFISFV TSEASDKCQK EKRKTINGDD LLWAMATLGF  60
EDYIEPLRIY LARYREGDAK GSARGGDGSA KGNAVGAMPG PSSQQFVHQG SLNYVNPQEE  120
YYVPLNNMGN GN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-57NF-YB family protein