PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g945660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 160aa    MW: 18597 Da    PI: 5.6504
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g945660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.4e-084262346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                      +W++Ia +++ gRt++++k++w++
  Pd.00g945660.m01  4 RWSLIAGRLP-GRTANDVKNFWNT 26
                      4*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MHVRWSLIAG RLPGRTANDV KNFWNTRLGR KMASVVVEKV KEKSPETKKD IAVRPQSRRL  60
SKTSHYLSGH KTVTSRHNQP EENFSKLPIL PSSPIEDEVD WWETLLEDED NVERTKCSCL  120
LLEEDHFTNC CVEDFAQWTI ADFRYLEDCP CWIGSSDMDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.14e-12MYB family protein