PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g948060.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 187aa    MW: 21430.9 Da    PI: 10.7215
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g948060.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.24e-1347103155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ +e Aa a++ a++k++g
  Pd.00g948060.m02  47 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 103
                       57*******************99998898888888********************98 PP
2AP231.73.9e-10146180138
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++g 
  Pd.00g948060.m02 146 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGM 180
                       89****99**********99966...3.6*********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MAKLSNQKAT AKNNIISNAN AANNTTVTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR  60
YEAHLWDKNC WNESQNKKGR QGAYDDEEAA AHAYDLAALK YWGPDTILNF PLSTYPKELK  120
DMEGQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYGM  180
FNKNGSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.17e-75AP2 family protein