PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g948940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 350aa    MW: 37890.6 Da    PI: 7.8342
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g948940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.53e-07281349668
               NAM   6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkky 68 
                       +F+P+d el+ e+L++k+   +    + ++e+i+++d    iy+ +P +Lp   k++ ++ +fF+k  ++y
  Pd.00g948940.m01 281 HFDPSDAELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSNFHFFHKIINAY 349
                       6*********.999999876664555444456777766677**********.556778899****977766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MLQSEQMINL LWNLARQAIV SKVDEPKKGK VANVSSRNHI EESQHGMSFA SFSGNNSTGS  60
CLNFSTMAQN PAIFQSLPDM AQQGYKVGLA PQAVQQKNHQ ISERKTGGGS NNADDGLKAA  120
SGKSSSSIGQ RQTLVFDNSA RTLNFMSSPF SASEATYVTT AATCYCCQVP KELRLLRLER  180
GGRLSDCLGN LRMLRKLSLQ SNSFDGTVPS SLSQCTLLLS GKLPAEIGNL SNLQIFNIAS  240
NHLSGEISGE LPPRLKYLNL SSNSFSGEIP KSIVNLTGLQ HFDPSDAELL EHLAAKCGVG  300
NSKPHMFIDE FIPTLDGDNG IYYDHPANLP GSKNDGSNFH FFHKIINAYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-21NAC family protein