PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g951350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 194aa MW: 22107.8 Da PI: 9.5624

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g951350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEd+ l+d +k +G g W+ ++++ g++R++k+c++rw++yl Pd.00g951350.m01 14 RGTWCAEEDKVLADHIKTHGEGKWSHVSKKTGLNRSGKSCRLRWLNYL 61 899*******************************************97 PP
2	Myb_DNA-binding	49.3	1.2e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+ Pd.00g951350.m01 67 RGNISPEEEDLIIRMHKLLGNK-WSLIAGRLP-GRTDNEIKNFWN 109 7999****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MGRKPSGAKD GQKRGTWCAE EDKVLADHIK THGEGKWSHV SKKTGLNRSG KSCRLRWLNY 60 LRPDVKRGNI SPEEEDLIIR MHKLLGNKWS LIAGRLPGRT DNEIKNFWNI NLSRRVLEEG 120 RSPNNQRGIK TFNCTKASPM IPSHDDHDHD QMVENAADAT LPGSVRKDHE NSFLRDLDNF 180 INDLLRDSGI NGEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	6e-55	MYB family protein