PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g952160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 240aa    MW: 26589 Da    PI: 5.8252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g952160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-1659110155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  + +Wv+e r+p++  k+ r++lg++ tae+Aa+a++ a++++ g
  Pd.00g952160.m01  59 PVYRGVRRRN-NDKWVCEMREPKK--KKSRIWLGTYPTAEMAARAHDVAALAFSG 110
                       68*****887.8*********844..46**********************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDMSFSQLSD SVDQPESSSL SDASVTTQGA SCSDGDVILA SSRPKKRAGR RVFKETRHPV  60
YRGVRRRNND KWVCEMREPK KKKSRIWLGT YPTAEMAARA HDVAALAFSG KLACINFADS  120
AWRLPLPASM DTMDIRRAAA EAAEGFRPAE FGGVCSGSSD EKESMVVQVE EKNKKGSVNL  180
ERSRSLSLSY WDEDEVFDMP RLLHDMAEGL LLSPSQCLGG YMNLDDMGTD ADVKLWSFSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16583RRRNNDKWVCEMREPKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-55ERF family protein