PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g952180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 238aa    MW: 26615.9 Da    PI: 5.0974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g952180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-1757108155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  + +Wv+e r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  Pd.00g952180.m01  57 PVYRGVRRRN-NDKWVCEMREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 108
                       68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDVSELSDPV EQPESSSLSD ASVTTRGPSL SDGEVILASS RPKKRAGRRV FKETRHPVYR  60
GVRRRNNDKW VCEMREPNKK KSRIWLGTYP TAEMAARAHD VAALAFRGKL ACLNFADSAW  120
RLPVPASMDP LDIRRAAAEA AEGFRPAEFG GVCNGSSDEK ERMAVQVEEE NNKGSVNLER  180
SRSLSLSYWD EEEEFDMPRL LHDMAEGLLL SPPQRLGSDM NLDDMGNDAD IKLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-58ERF family protein