PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g953600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 152aa    MW: 17107.5 Da    PI: 10.617
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g953600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.22.3e-253413832128
               NAM  32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrap 114
                       + + + +iy+ +P +Lp   k++ ++ +fF+k+ +++atg+rk+r+        +++ +W++tgk+k++++ +g ++g+kk++v+y  +++ +
  Pd.00g953600.m01  34 KYFGDNGIYYDHPANLP-GSKNDGSSFHFFHKTINAHATGHRKRRKvdchrslaAEHVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGS 124
                       4577889**********.556778899******************86888888877999************.999***********4334667 PP

               NAM 115 kgektdWvmheyrl 128
                       k+ k++Wvmh+y+l
  Pd.00g953600.m01 125 KADKSNWVMHQYHL 138
                       888*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MTHGGNFAKL IIGARRYMGH RLKSIKPDKG LMSKYFGDNG IYYDHPANLP GSKNDGSSFH  60
FFHKTINAHA TGHRKRRKVD CHRSLAAEHV RWHKTGKTKP IMENGVQKGC KKIMVLYKSS  120
KKGSKADKSN WVMHQYHLGT EDGEKEGESG SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.13e-39NAC family protein