PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g954330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 180aa    MW: 20033.5 Da    PI: 9.9212
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g954330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.13.7e-16122158135
              GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+  nC++t++p+WR gp g+k+LCn CG+++rk ++
  Pd.00g954330.m01 122 CTnyNCRVTESPMWRTGPLGPKSLCNRCGIRFRKIKQ 158
                       55559****************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MDPKGVQNGF EMTNFDQHEA NLGGTDCLVD LTLRLGIPSS DKNNDQQSHT ANGSSTSQAV  60
DRSSLNNLNV NGYRQYEFPA PPELKNYCII NISNRRGKTG GSRKRKTTGR RPAKVGDIDK  120
TCTNYNCRVT ESPMWRTGPL GPKSLCNRCG IRFRKIKQKE ETEQQAAEAA FKQLHAVSKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195112RRGKTGGSRKRKTTGRRP
2102107SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.12e-13GATA family protein