PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g954350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 321aa    MW: 34736.8 Da    PI: 10.5949
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g954350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.89e-06212234123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C  CgksF + s L  H+++H
  Pd.00g954350.m01 212 YTCFECGKSFASGSALGGHMSSH 234
                       9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MIPMIRSYQP RPPGLIMSNP HMMIRETHVP VQPTQTGPTF PNHTLNLNFM RFQPPRVALA  60
PHFPLNNISS PTTLSGFHGR TGVMRNQQSS SQTYHYGNIS PNPIMNAATR FRPPPSFSSN  120
INIGRASIMS GNQISLPTLV RATRFPTSSQ SQFVPNHEPS TSSSIIKEEP GDGHQQTHVA  180
RESTTTTVAA AASIAIATKS SQPPRPKPMG EYTCFECGKS FASGSALGGH MSSHAKKRKL  240
EAATSGRRFK PGDSFFDYVH HSPGFENGSS SRTATNPPTM SINGPSGPST NEGTKGIEEP  300
SGKREEKKSK DGDEEGPTSR Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1303310KREEKKSK
2303311KREEKKSKD