PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g955740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 529aa MW: 58627.2 Da PI: 6.0823

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g955740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.5e-07	276	297	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H Pd.00g955740.m01 276 FCAICGKGFKRDANLRMHMRGH 297 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MDHKEKLCAD AWENPSSGND LTSKISSDCP PFANFKPQLH QQKWEDPSIL DYGGIRIEPS 60 FQEFNQPSET QTSLPCNSNN DTKMADREDG RMLETPQANK SQDWDPRTML NNLSFLEQKI 120 HQLQDLVHLI VGRRGQVLGR PDELVAQQQQ LITADLTSII AQLISTAGSL LPSVKHTLST 180 TTPSIGQFGQ LGGSFVPSGV GTDAPVKLQN SIGSKLADQS NQTDLISNYG TEQNYSVEEH 240 ESKDEEDADE GENLPPGSYE ILQLEKEEIL APHTHFCAIC GKGFKRDANL RMHMRGHGDE 300 YKTAAALAKP NKESSSEPTL IKRYSCPYAG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK 360 SYTCSRCNTK KFSVIADLKT HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL 420 DETKGTLGPT DHGEGSEASN RVGNINFSFG STAPGGGDVV QNLMDVKESI NDPTSYFSPL 480 NFETCNFDGF HEFPRPPFED SESSFSFLMP GSCNYTHKSG GEPNSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MDHKEKLCAD AWENPSSGND LTSKISSDCP PFANFKPQLH QQKWEDPSIL DYGGIRIEPS  60
FQEFNQPSET QTSLPCNSNN DTKMADREDG RMLETPQANK SQDWDPRTML NNLSFLEQKI  120
HQLQDLVHLI VGRRGQVLGR PDELVAQQQQ LITADLTSII AQLISTAGSL LPSVKHTLST  180
TTPSIGQFGQ LGGSFVPSGV GTDAPVKLQN SIGSKLADQS NQTDLISNYG TEQNYSVEEH  240
ESKDEEDADE GENLPPGSYE ILQLEKEEIL APHTHFCAIC GKGFKRDANL RMHMRGHGDE  300
YKTAAALAKP NKESSSEPTL IKRYSCPYAG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK  360
SYTCSRCNTK KFSVIADLKT HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL  420
DETKGTLGPT DHGEGSEASN RVGNINFSFG STAPGGGDVV QNLMDVKESI NDPTSYFSPL  480
NFETCNFDGF HEFPRPPFED SESSFSFLMP GSCNYTHKSG GEPNSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein