PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g957710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 264aa MW: 29924.3 Da PI: 8.8739

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g957710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	106	125	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ Pd.00g957710.m01 106 FACSICSKTFNRYNNMQMHM 125 78*****************9 PP
2	zf-C2H2	11.8	0.00076	190	212	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C k+F k + ++H +++ Pd.00g957710.m01 190 FMCRKCAKTFAVKGDWRTHEKNC 212 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MQCLPLLSQF TDTKPVKIED VGVQKEGFGV KEEKMGQVTV ALRIGLPNST SEADQSDTHH 60 ENKKVLDLKE EEGVAMKKSF HGCSFNAESR FWIPTPAQIL VGPMQFACSI CSKTFNRYNN 120 MQMHMWGHGS EFRKGPDSLK GTQPAAMLRL PCYCCAQGCK NNINHPRAKP LKDFRTLQTH 180 YKRKHGAKPF MCRKCAKTFA VKGDWRTHEK NCGKLWYCTC GSDFKHKRSL KDHIRSFGKG 240 HSPHPSLDGF HEDEKECITG SEDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-122	C2H2 family protein