PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g961660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 235aa MW: 26557.2 Da PI: 9.655

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g961660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.5e-08	14	51	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q G++ + R++k+c++rw +yl Pd.00g961660.m01 14 RGQWTPEEDNKLSSYIAQRGTR--------L--QRCGKSCRLRWTNYL 51 89****************99........4..5**********97 PP
2	Myb_DNA-binding	44	5.1e-14	58	100	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ E++ +v+++ G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g961660.m01 58 GQFSDAEEQTIVKLHSVVGNR-WSIIAAQLP-GRTDNDVKNHWNT 100 7899***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QRGTRLQRCG KSCRLRWTNY LRPDLKHGQF 60 SDAEEQTIVK LHSVVGNRWS IIAAQLPGRT DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS 120 HLMAEIATTL APPQVAHLAE AALGCFKDEM LHLLTKRRID FQFQHSNATP GNSTATYINS 180 KQEEKDDTIE KIKIGLSRAM QEPDMLTSNK PWDPTGATSA NFTRDLYSIA QPKNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-108	MYB family protein