PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g969090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 256aa    MW: 28653 Da    PI: 5.7391
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g969090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26071.61.6e-2227230100
            DUF260  30 fanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                       f+n+h+l+G+sn++k+ k++++e++++am+s++ye+++ra+ Pv G++g+i++l+ ql+q+ +el +++++
  Pd.00g969090.m01   2 FQNAHRLYGVSNIMKIRKQVHPEQQNEAMRSIIYESNMRAKFPVTGCMGIINQLNFQLQQAIEELRYVRTH 72 
                       9****************************************************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MFQNAHRLYG VSNIMKIRKQ VHPEQQNEAM RSIIYESNMR AKFPVTGCMG IINQLNFQLQ  60
QAIEELRYVR THLAICKDQC QYRIPPSPPH YSSCPSSQLQ LGMPSNNDAS AALTIYQHQY  120
QYASAGGGAA GMSFLANEYL ANGLSAVYID DNDVVKPLRV QHPYYSDHNV DQLMAVQSNL  180
VSSQAFPIHQ EMDVPHDYDD IPFDTIADDR QSYIESKEAC ESSAESSFKG TTQSIEHVSQ  240
NDLKSAAACF SLTSVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.17e-17LBD family protein