PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g970520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family DBB
Protein Properties Length: 238aa    MW: 26019.4 Da    PI: 4.6125
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g970520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.42.5e-07444539
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                       C+ +e+ +++  C  ++  lC++C +e H        H++
  Pd.00g970520.m01  4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44
                      7*****************************65667777765 PP
2zf-B_box27.56.5e-095394237
          zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                      + ++C+ +++k + +fC +++ l+C+dC + +H+       H
  Pd.00g970520.m01 53 KLPRCDICQDKAVFIFCVEDRALFCQDCDEPIHSAnslsanH 94
                      789********999*******************655666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLNCL SNKLPRCDIC  60
QDKAVFIFCV EDRALFCQDC DEPIHSANSL SANHQRFLAT GIRVALSSSC TKEAETSSLE  120
PPEHSTQQIS TKISAPQASG ISSPWGVDDL LQLSDFESSD KKESLEFGEL EWIADMGLFG  180
EQFPQKAVAA AEVPQLPASQ PSNFASYRPP KSNGPYKKPR IEISDDDEHF TVPDLGIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06040.11e-103DBB family protein