PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g970650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 445aa MW: 51775.7 Da PI: 7.6588

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g970650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.1	4.5e-26	265	355	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + ++tr gC+a++++ +++ kw+vtk+++eHnH+l+ Pd.00g970650.m01 265 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLM 355 6****************************************99883332.245899******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MLLRKQFYPV GYDDERRYKW QHFRQRFGQP VQENTIEFCN QAMVLDINVD DFDVFIKYTG 60 GLANYVRKKL KLFTVDAIEE VTAKAIIIEA KKKRIDKKDD RSKLVNKTDW QKKGKQSKEG 120 KLQEKFKDLF QDVHGLPPRR AVEHDIQLKR WGPATSCKIN HLGSWSGHGE IDLRLPLSSN 180 LGVGVWNIMD HQSVHGFDSD ESDLDMHAET YENNEGVEDV LSENLDLCLD EKEGIAEPSA 240 DLPMNIEALE PNIGMEFNSR DEAREFYVAY GRRSGFTVRI HHNRRSRVNN QVIGQDFVCS 300 KEGFRAKKYV HRKDRVLPPP PVTREGCQAM IRLALRDGLK WVVTKFVKEH NHKLMSPSKV 360 PWRGSGKHLA SEDEKDKRIR ELSLELYNER QKCKRRCAAY EEQLNLILKD LEKHTEHMSK 420 KVADIVQSIR EIEEEQSEDS DSGWT

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MLLRKQFYPV GYDDERRYKW QHFRQRFGQP VQENTIEFCN QAMVLDINVD DFDVFIKYTG  60
GLANYVRKKL KLFTVDAIEE VTAKAIIIEA KKKRIDKKDD RSKLVNKTDW QKKGKQSKEG  120
KLQEKFKDLF QDVHGLPPRR AVEHDIQLKR WGPATSCKIN HLGSWSGHGE IDLRLPLSSN  180
LGVGVWNIMD HQSVHGFDSD ESDLDMHAET YENNEGVEDV LSENLDLCLD EKEGIAEPSA  240
DLPMNIEALE PNIGMEFNSR DEAREFYVAY GRRSGFTVRI HHNRRSRVNN QVIGQDFVCS  300
KEGFRAKKYV HRKDRVLPPP PVTREGCQAM IRLALRDGLK WVVTKFVKEH NHKLMSPSKV  360
PWRGSGKHLA SEDEKDKRIR ELSLELYNER QKCKRRCAAY EEQLNLILKD LEKHTEHMSK  420
KVADIVQSIR EIEEEQSEDS DSGWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-37	FAR1 family protein