PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g970680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 200aa    MW: 23535.2 Da    PI: 8.486
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g970680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.34.1e-2632122190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY eYAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+ +++  +++   +r+ tr gCka++++  +++g+w vtk+  eHnH+l+
  Pd.00g970680.m01  32 DFYYEYAKHTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKLM 122
                       6*****************************************9998822333349**********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MPLQHCNFVN DGLISMEPST GMSFQSLDDA RDFYYEYAKH TGFTIRTNRI RHSLKNMAII  60
GRDFVCSREG FRAAKHTLRK DRVLPPRPIT REGCKAMIRL AARDEGRWIV TKFIREHNHK  120
LMAHCKFPGE LPIINILSEV EKDKKIQDLY DELQRERERS AAFQQQLCMI LKDLEEHAEY  180
ISVRVEDIVK SMKEIELRDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-42FAR1 family protein