PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g972520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 215aa    MW: 24025.1 Da    PI: 4.9177
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g972520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.63.2e-361051962102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k++++++d++l+++isw + gnsfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+kv++++         weF ++ Fk+gk++ll
  Pd.00g972520.m01 105 FLSKTFDLVDDPSLDSIISWGSGGNSFVVWDPLEFSRLILPRNFKHNNFSSFVRQLNTYGFRKVDTDK---------WEFGNEAFKRGKRHLL 188
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       +ki+r+ks
  Pd.00g972520.m01 189 KKIQRRKS 196
                       ******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MNPKDESYPK SPPTSAELDP ENPLRPEMSE PLLGSQSIPS FTCPLMEFEA FCALNPSESS  60
WSSGAFEFDE KAPTATSSFM DAGGAEHVAV PQPLECLQDS PVPPFLSKTF DLVDDPSLDS  120
IISWGSGGNS FVVWDPLEFS RLILPRNFKH NNFSSFVRQL NTYGFRKVDT DKWEFGNEAF  180
KRGKRHLLKK IQRRKSPQSL QLVICSSNSG VQFII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188194LKKIQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.15e-64HSF family protein