PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g977300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 776aa MW: 87134.6 Da PI: 6.1625

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g977300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.5	1.4e-25	179	263	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++HnH Pd.00g977300.m01 179 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYQVTQFEEQHNHG 263 ****************************************999.999**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence
MGAFKSAINS LSCFQAALVL VLLIATGETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN 60 TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV 120 GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN 180 KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH 240 MIITRQPDGK YQVTQFEEQH NHGNVNSSIA RALPEQHNHD NVNLSIAQAL PLQRECTVPE 300 AADADSVKEL GSLSKSALDS MNRGFRNDWL KWMFREREKW AVVYGRNTFF VDRKGSHLVE 360 SLFHDLRNYL YSDLDVLDFV KYFERVVDEQ RYKEIEANDE MNRCMPRLMG NVILLKHASD 420 VYTPRAFEVF QRGYEKCLNI VVNQCSENGP LFEYKTNIFG KSREHTVTFN SSDDSVICSC 480 KKFDSVGFLC SHALKVLDHI NIKVVPSKYI LKRWTKDARL GSARENDVSS IRDNPKLVVA 540 SRYKNMCGRI ILLSAKASES EEAFQFAVGQ LDEVMEGVEK ILTLKPQDAQ AFTSSSTANA 600 SDSERAVIFP DGNAIEDQDD NVVKGAKEKE TAVFDKGQLT NVNGEFSSTK RIQNVDTSLQ 660 NTDSCISSPS LYVSPEGTTA NPIMQGLYNF EANQVVQCMY QQDNLVMEEQ TNPNMYQPLN 720 YFSNQHDSPG HSQLLQEPLI NGTYQEPVSS TPELRQAMDL DVQHAHSSSF LLLDRG

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence

MGAFKSAINS LSCFQAALVL VLLIATGETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN  60
TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV  120
GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN  180
KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH  240
MIITRQPDGK YQVTQFEEQH NHGNVNSSIA RALPEQHNHD NVNLSIAQAL PLQRECTVPE  300
AADADSVKEL GSLSKSALDS MNRGFRNDWL KWMFREREKW AVVYGRNTFF VDRKGSHLVE  360
SLFHDLRNYL YSDLDVLDFV KYFERVVDEQ RYKEIEANDE MNRCMPRLMG NVILLKHASD  420
VYTPRAFEVF QRGYEKCLNI VVNQCSENGP LFEYKTNIFG KSREHTVTFN SSDDSVICSC  480
KKFDSVGFLC SHALKVLDHI NIKVVPSKYI LKRWTKDARL GSARENDVSS IRDNPKLVVA  540
SRYKNMCGRI ILLSAKASES EEAFQFAVGQ LDEVMEGVEK ILTLKPQDAQ AFTSSSTANA  600
SDSERAVIFP DGNAIEDQDD NVVKGAKEKE TAVFDKGQLT NVNGEFSSTK RIQNVDTSLQ  660
NTDSCISSPS LYVSPEGTTA NPIMQGLYNF EANQVVQCMY QQDNLVMEEQ TNPNMYQPLN  720
YFSNQHDSPG HSQLLQEPLI NGTYQEPVSS TPELRQAMDL DVQHAHSSSF LLLDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	2e-27	FAR1 family protein