PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g977400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 702aa    MW: 76340.1 Da    PI: 4.6913
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g977400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like781.2e-24210263155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  Pd.00g977400.m01 210 KPKVVWTNSLHNQFLLAIKHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263
                       79*******************.********************************6 PP
2Myb_DNA-binding27.38.4e-09213262248
                       SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                         WT  ++ +++ a+k  G +   +k+I + m+  g+t++++ s++qky+
  Pd.00g977400.m01 213 VVWTNSLHNQFLLAIKHIGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 262
                       68***********************************************7 PP
3Response_reg76.59.9e-26271351109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       +l+vdD+ + + ++  +l+   y +v +++++ +al++l++++  +Dl+++D+ mp+m+G+el k+ +ee  klp+i+++a ++e+ +l+ l+
  Pd.00g977400.m01  27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKSLE 117
                       89*********************.9999***********99999*************************99.********************* PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        G+  +++Kp++++++ +
  Pd.00g977400.m01 118 GGVVYYIVKPVSKDDIKN 135
                       **************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA  60
LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV  120
VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK  180
QEKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI  240
LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ  300
RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR  360
SFPQLIGSGQ LPLLSNNQAN ILCQQPMLGN GNGDQLLCQA NSRTAAFGVQ QLMNTFGNGG  420
NQISSSYTPL SSSFENMGST VNNVNQRVPN SSHQLVTNFA GSQIMSSSGR ELVGLMGSQP  480
AGMLNNITNI NIGGGYPNVS LTGAPIGNNN GIFNSGYMAQ LGASSSSMSS SAGFEISASS  540
AYQFPPSLLK NNGDDQQQNV PVLPPSAGNI NDQCGLANMN VGGGNVENSH SGVMDNTITT  600
DAPPTLINNN NISHEQELVG DIDDLMLSNL FMDQQNYEPS PPPFQQQDGD QDQLPPDFAS  660
FLYQVEVPDP SADQVPNLDS YHVEDNADCD DDFLNAILDS DM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-57ARR-B family protein