PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g981020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 210aa    MW: 23666.2 Da    PI: 4.8969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g981020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-2075124355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ +++g
  Pd.00g981020.m01  75 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFAMRG 124
                       9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MFKFVDHHHH SQPLPQLPFN ENDSEEMLLY GVLAEAPAGG DHNNSSESIT HSNKDIHEEV  60
NSSNSTPEED QAISYRGVRR RPWGKFAAEI RDSTRNGVRV WLGTFDTAEE AALAYDQAAF  120
AMRGSLAVLN FPADVVYQSL VEMKYGFDEG SSPVLALKRR HTLKRKSSMN KKKKLSDHQK  180
NDENDDEDQL VLEDLGADYL EELLTISAMT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158174KRRHTLKRKSSMNKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-49ERF family protein