PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g982480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 592aa    MW: 64830.9 Da    PI: 4.7001
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g982480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3672.6e-1122225922374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        ++Ll+cA+ ++++d  +a + L rl+e +s  gdp++R+ +yfteAL++r+++   +  k+l++++t ++  ++ + ++k++++++P+ kf+
  Pd.00g982480.m01 222 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDLGDPTERVGFYFTEALQSRVSS--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSKFA 311
                       689******.566699999***********************************..6666778888888888********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + +
  Pd.00g982480.m01 312 HLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPAASLFATGNRLRDFAKLLELNFEFEP-ILT 403
                       ******************************************666659*********99999999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        +++le + +rv+p+EalaVnl+lql++llde+ +  +   + Lkl ksl+Pk+v++ e ea++++  F  rf +al+yy+alf+sle ++pr
  Pd.00g982480.m01 404 PVHELEESCFRVEPDEALAVNLMLQLYNLLDETPTAVQ---SALKLAKSLNPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESLEPNMPR 493
                       ******************************99999998...9*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLv 368
                       +s er +vE+ llgr+i  vv  e+   +rer e +e+W+  +e++GF+pv+ls++a++qak ll ++++  y++ e+   ++ l W++ pL+
  Pd.00g982480.m01 494 DSPERLNVEKLLLGRRIGGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESPPGFLsLAWNEVPLF 586
                       ***********************998769****************************************999999888666666********* PP

              GRAS 369 svSaWr 374
                       +vS+Wr
  Pd.00g982480.m01 587 TVSSWR 592
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    
MDFNQLQQPA SERLGNQVVI PLFLDLQLSV SGWIWPENGI YVRRHPNLGY GLTGSGYTDP  60
FQLSGSSDAG GEPGFPFPNL DHHPTGFRFS DLGGGGAAEF DSDEWMDSII GGGDSTDSSN  120
LPSACDTWHG SNADFGLYGA DPFQPPCPSR LNNPCSPPSD LNRVIFSETQ NQLPAWTAPP  180
PPPPAPHVVV KQAKSADPPP QPNDAVGVSS RSPEIESAPP LLKALLDCAR LAESDPDRAV  240
KSLIRLRESV SDLGDPTERV GFYFTEALQS RVSSLQSEKS LAATTTYDTA CEDFTLSYKA  300
LNDACPYSKF AHLTANQAIL EATERATKIH IVDFGIVQGV QWAALLQALA TRSTGKPSRI  360
RISGIPAPSL GTSPAASLFA TGNRLRDFAK LLELNFEFEP ILTPVHELEE SCFRVEPDEA  420
LAVNLMLQLY NLLDETPTAV QSALKLAKSL NPKIVTLGEY EANLSRVGFT SRFKNALKYY  480
TALFESLEPN MPRDSPERLN VEKLLLGRRI GGVVGPEQPG TKRERFEDKE QWKYLMESSG  540
FEPVALSHYA VSQAKILLWN YNNSLYSLIE SPPGFLSLAW NEVPLFTVSS WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein