PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g984760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 220aa    MW: 24698.9 Da    PI: 6.4281
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g984760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.51.7e-20127214183
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                       f+k+lt sd++++g +++ +++a+++       +++    ++l+  d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F 
  Pd.00g984760.m01 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL 214
                       99****************************964333..4459***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTFSASNHPQ GSSRIGMSGD ALYKELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASMH  60
QGSEQQMPSF NLPSKILCKV VNVQLRAEPE TDEVYAQVTL LPEADQSEIT SPDPPLPETP  120
RCTVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ QPPWQELVAA DLHGNEWHFR  180
HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRQVYSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-133ARF family protein