PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g984760.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 241aa    MW: 27095.8 Da    PI: 6.8989
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g984760.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.22e-20148235183
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                       f+k+lt sd++++g +++ +++a+++       +++    ++l+  d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F 
  Pd.00g984760.m02 148 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL 235
                       99****************************964333..4459***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MTFSASNHPQ GSSRIGMSGD ALYKELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASMH  60
QGSEQQMPSF NLPSKILCKV VNVQLRQMPS FNLPSKILCK VVNVQLRAEP ETDEVYAQVT  120
LLPEADQSEI TSPDPPLPET PRCTVHSFCK TLTASDTSTH GGFSVLRRHA DDCLPPLDMS  180
QQPPWQELVA ADLHGNEWHF RHIFRGQPRR HLLTTGWSVF VSSKKLVAGD AFIFLRQVYS  240
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-128ARF family protein