PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g984960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 625aa MW: 71812.8 Da PI: 8.1369

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g984960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.8	2.4e-20	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 ++Y+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel Pd.00g984960.m01 63 EYYSEFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSHERKPQRNRKSSRCGCQAYMRISKTTelgAPEWRVTGFANHHNHEL 155 69***********9998877356667999*********99999999***************99888889***********9 PP FAR1 90 a 90 Pd.00g984960.m01 156 L 156 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MMSEDAGVML VVYDDPSDQR SLSLDETSST EESPDETRLS FETTNDVIPY IGQRFSTHDA 60 AYEYYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSH ERKPQRNRKS 120 SRCGCQAYMR ISKTTELGAP EWRVTGFANH HNHELLEANQ VRFLPAYRTI SESDKSRILM 180 FAKTGISVQQ MMRLMELEKC VQPGYLPFTE KDVRNLLQTF RKLDPEDESI DLLRMCRNIK 240 EKDPNFKFEY TLDSDHRLEN IAWSYASSIQ SYEIFGDAVV FDTTHRLTAF DMPLGIWVGI 300 NNYGMPCFFG CVLLREESLR SFSWALKAFL SFMYGKAPQT ILTDQNTFLK EAISMEMPTT 360 KHALCIWMIV AKFPSWFNAV LGERYNEWKR MTTIGQSKSI NAFIQRFLSA QTRLAHFIEQ 420 VAVAVDFKDQ AGEQQTMQQN LQNISLKTGA PMESHAASTF TPYAFSKLQE QLVLAAHYAS 480 FEMEDGFLVR HHTKAEGGRK VYWVPREGII SCSCHHFEFS GILCRHALRV LSTGNCFQIP 540 ERYLPVRWRR ISIPSAKLLQ SAPSDHAERI QLLQNIVSTL VTESAKSRER LDIATEQVSI 600 LLSRIREQPV SVQSTREISS MHRNI

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MMSEDAGVML VVYDDPSDQR SLSLDETSST EESPDETRLS FETTNDVIPY IGQRFSTHDA  60
AYEYYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSH ERKPQRNRKS  120
SRCGCQAYMR ISKTTELGAP EWRVTGFANH HNHELLEANQ VRFLPAYRTI SESDKSRILM  180
FAKTGISVQQ MMRLMELEKC VQPGYLPFTE KDVRNLLQTF RKLDPEDESI DLLRMCRNIK  240
EKDPNFKFEY TLDSDHRLEN IAWSYASSIQ SYEIFGDAVV FDTTHRLTAF DMPLGIWVGI  300
NNYGMPCFFG CVLLREESLR SFSWALKAFL SFMYGKAPQT ILTDQNTFLK EAISMEMPTT  360
KHALCIWMIV AKFPSWFNAV LGERYNEWKR MTTIGQSKSI NAFIQRFLSA QTRLAHFIEQ  420
VAVAVDFKDQ AGEQQTMQQN LQNISLKTGA PMESHAASTF TPYAFSKLQE QLVLAAHYAS  480
FEMEDGFLVR HHTKAEGGRK VYWVPREGII SCSCHHFEFS GILCRHALRV LSTGNCFQIP  540
ERYLPVRWRR ISIPSAKLLQ SAPSDHAERI QLLQNIVSTL VTESAKSRER LDIATEQVSI  600
LLSRIREQPV SVQSTREISS MHRNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein