PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g985740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 118aa    MW: 13758.6 Da    PI: 6.5129
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g985740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.51.6e-108102294
                       EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE....EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy..rkksgr..yvltkGWkeFvkangLkegDfvvFkldg 86 
                       +k+lt  dv+ +  lv+p + ++e+    g    +++++++  ++ + + ++l+   r+++ r  ++ ++GW +Fv+ +gLk gD ++F+ + 
  Pd.00g985740.m01   8 EKELTETDVGHK--LVVPVRWLDEMprfeG----GNREVQFGVLDDKGFHFTLCCsiRNGGYRkpVLQAEGWLRFVNYKGLKIGDNIIFRPQV 94 
                       577888888865..9**********76644....444566665556556666544335444445566669********************654 PP

                       SSEE..EE CS
                B3  87 rsefelvv 94 
                       ++ +e  +
  Pd.00g985740.m01  95 DDFRESIF 102
                       44444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MEGAHELEKE LTETDVGHKL VVPVRWLDEM PRFEGGNREV QFGVLDDKGF HFTLCCSIRN  60
GGYRKPVLQA EGWLRFVNYK GLKIGDNIIF RPQVDDFRES IFQVRAQRQN INGHWVDI